EMBOSS

BLAST

PAIRWISE SEQUENCE ALIGNMENT

ANALYZE SEQUENCE
Analyze sequence

Copy Paste your sequence or upload a file

OR UPLOAD FILE

  Select Organism OR Location in scaffold from phytophthoraDB(e.g; scaffold_1:12-233)
  
 

Sequence Type

 

PhytophthoraDB copyright Virginia Bioinformatics Institute @ 2004 Comments/questions:
webmaster@phytophthoraDB

 

 





































This analysis suit takes, either a genome sequence or a EST sequence.
Given a EST sequence, it predicts the coding regions, and comments.
In case of a genome sequence, it plots the log-likelihood and the fickett plot for the user to predict if it is a coding or a non-coding sequence. Currently it takes either a P.sojae,P.ramorum or a soybean. Later this functionality will be extended to other organisms.
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